CONTAGIO Publications
Articles that have been published as part of the work completed during the course of the CONTAGIO project can be found here.
ReCoDID Publications
Articles that have been published as part of the work completed during the course of the ReCoDID project can be found here.
*ReCoDID was...
Bridging Borders: the virtual biorepository system, a sustainable global biobanking system for epidemic threats preparedness
Judith Giri, Amy Price, Zoe Steinberg, Thomas Jaenisch, May Chu
Frontiers in Tropical Diseases
28 October 2025
Usage of the Terms "Biorepository" and "Biobank": A Process to Achieve a Working Definition Among Global Partners
Zoe Steinberg, Judith Giri, Anyela Lozano-Parra, Gustavo Aldopho Gómez, Laura Pezzi, Van-Mai Cao-Lormeau, Md Moyeen Chowdhury, Ibrahim Swaray, Ecaterina Noroc, Elena Romancenco, Inès Vigan-Womas, Ousmane Noël Diallo, Kareen Arias, David Perera, Mong How Ooi, Jajah Fachiroh, Amy Price, Julia Poje, Nikaash Pasnoori, May Chu
Biopreservation and Biobanking
3 April 2025
Application of causal inference methods in individual-participant data meta-analyses in medicine: addressing data handling and reporting gaps with new proposed reporting guidelines
Heather Hufstedler, Nicole Mauer, Edmund Yeboah, Sinclair Carr, Sabahat Rahman, Alexander M. Danzer, Thomas P. A. Debray, Valentijn M.T. de Jong, Harlan Campbell, Paul Gustafson, Lauren Maxwell, Thomas Jaenisch, Ellicott C. Matthay, and Till Bärnighausen
BMC Medical Research Methodology
19 April 2024
Cohort Profile: ReCoDID Consortium’s Harmonized Acute Febrile Illness Arbovirus Meta-Cohort
Gustavo Gómez, Heather Hufstedler, Carlos Montenegro, Yannik Roell, Anyela Lozano, Adriana Tami, Tereza Magalhaes, Ernesto T.A. Marques, Angel Balmaseda, Guilherme Calvet, Eva Harris, Patricia Brasil, Victor Herrera, Luis Villar, Lauren Maxwell, Thomas Jaenisch
medRxiv Preprint
12 October 2023
Overlapping research efforts in a global pandemic: a rapid systematic review of COVID‑19‑related individual participant data meta‑analyses
BMC Health Services Research
6 July 2023
Propensity-based standardization to enhance the validation and interpretation of prediction model discrimination for a target population
Statistics in Medicine
13 June 2023
"How about me giving blood for the COVID vaccine and not being able to get vaccinated?" A cognitive interview study on understanding of and agreement with broad consent for future use of data and samples in Colombia and Nicaragua
PLOS Global Public Health
17 May 2023
Transparent reporting of multivariable prediction models developed or validated using clustered data (TRIPOD-Cluster): explanation and elaboration
Implementing clinical trial data sharing requires training a new generation of biomedical researchers
Ulrich Mansmann, Clara Locher, Fabian Prasser, Tracey Weissgerber, Ulrich Sax, Martin Posch, Evelyne Decullier, Ioana A. Cristea, Thomas P. A. Debray, Leonhard Held, David Moher, John P. A. Ioannidis, Joseph S. Ross, Christian Ohmann, & Florian Naudet
Nature Medicine
2 February 2023
Multiple imputation of incomplete multilevel data using Heckman selection models
Johanna Muñoz, Matthias Egger, Orestis Efthimiou, Vincent Audigier, Valentijn M. T. de Jong, Thomas. P. A. Debray
Cornell University arXiv
12 January 2023
Dealing with missing data using the Heckman selection model: methods primer for epidemiologists
International Journal of Epidemiology
4 January 2023
Adjusting for misclassification of an exposure in an individual participant data meta-analysis
Research Synthesis Methods
5 October 2022
Adjusting for misclassification of an exposure in an individual participant data meta-analysis
Research Synthesis Methods
28 August 2022
Clinical prediction models for mortality in patients with covid-19: external validation and individual participant data meta-analysis
BMJ
12 July 2022
A blank check or a global public good? A qualitative study of how ethics review committee members in Colombia weigh the risks and benefits of broad consent for data and sample sharing during a pandemic
PLOS Global Public Health
6 June 2022
A few things to consider when deciding whether or not to conduct underpowered research
Harlan Campbell, Valentijn M.T. de Jong, Thomas P.A. Debray, Paul Gustafson
Journal of Clinical Epidemiology
April 2022
Systematic Review Reveals Lack of Causal Methodology Applied to Pooled Longitudinal Observational Infectious Disease Studies
Journal of Clinical Epidemiology
16 January 2022
Current trends in the application of causal inference methods to pooled longitudinal non-randomised data: a protocol for a methodological systematic review
BMJ Open
12 November 2021
Pre-pregnancy and pregnancy cohorts: a scoping review protocol
Lauren Maxwell, Regina Gilyan, Sayali Arvind Chavan, Marwah Al-Zumair, Shaila Akter, Thomas Jaenisch
F1000 Research
24 August 2021
Current trends in the application of causal inference methods to pooled longitudinal observational infectious disease studies—A protocol for a methodological systematic review
Bayesian adjustment for preferential testing in estimating the COVID-19 infection fatality rate
Continual updating and monitoring of clinical prediction models: time for dynamic prediction systems?
Diagnostic and Prognostic Research
1 January 2021
Individual participant data meta‐analysis of intervention studies with time‐to‐event outcomes: A review of the methodology and an applied example
Research Synthesis Methods
23 November 2019
Usage of the Terms "Biorepository" and "Biobank": A Process to Achieve a Working Definition Among Global Partners
Zoe Steinberg, Judith Giri, Anyela Lozano-Parra, Gustavo Aldopho Gómez, Laura Pezzi, Van-Mai Cao-Lormeau, Md Moyeen Chowdhury, Ibrahim Swaray, Ecaterina Noroc, Elena Romancenco, Inès Vigan-Womas, Ousmane Noël Diallo, Kareen Arias, David Perera, Mong How Ooi, Jajah Fachiroh, Amy Price, Julia Poje, Nikaash Pasnoori, May Chu
Biopreservation and Biobanking
3 April 2025